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== [[User:Mac/Literature Review|Extended Literature Review]] ==
== [[User:Mac/Literature Review|Extended Literature Review]] ==
I am still refining my literature organizational system, but basically it involves 3 steps:
* '''search''' (find literature from google, existing references, etc; get fulltext)
* '''triage''' (select signal from noise; skim pdfs in extended collection for useful/relevant papers)
* '''review''' (annotate & highlight selected papers and incorporate into the [[Diagnostic Kits#Bibliography|Diagnostic Kits Bibliography]]


'''Notes on Reference organization strategy'''
In particular, I am still looking for the perfect solution for organizing the triage step.  I've tried:
* Experimenting with [http://www.zotero.org/100ideas/items Zotero] to organize citations; testing a [http://www.zotero.org/groups/icp-biotech/items Zotero ICP-Biotech group library]
* [http://www.zotero.org/100ideas/items Zotero]
* Export later into a [http://simile.mit.edu/wiki/Citeline_User%27s_Guide SIMILE] citeline
* [http://www.mendeley.com/collections/33560/ICP-Diagnostics-Pipeline/ Mendeley]
* [http://mekentosj.com/papers/ Papers]
I like using papers the most overall, I like how effortless grabbing citations is with Zotero, and I like how Mendeley can synchronize PDFs between multiple computers and collaborators. Other Notes:
 
* I'm afraid we're making future work for ourselves by not being mindful of collecting metadata when we list a citation in our wiki bibliographies, which are currently plaintext.  I have a vision of us finishing the project and generating a [http://simile.mit.edu/wiki/Citeline_User%27s_Guide SIMILE citeline] eventually. Alas.
* Zotero can convert references into the mediawiki citation format by drag and drop, but the family of cite templates must be installed in mediawiki; see [http://evernote.com/pub/macowell/icp#Note/514ec54a-ab5c-4fa8-a638-58af29869429 my notes on how to install the cite templates].
* Zotero can convert references into the mediawiki citation format by drag and drop, but the family of cite templates must be installed in mediawiki; see [http://evernote.com/pub/macowell/icp#Note/514ec54a-ab5c-4fa8-a638-58af29869429 my notes on how to install the cite templates].
* Zotero, Mendeley, and Papers all support drag-n-drop citation copying in a variety of formats, including Harvard.


== [[User:Mac/Interviews|Interviews]] ==
== [[User:Mac/Interviews|Interviews]] ==

Revision as of 16:11, 10 September 2009

Résumé

science!

Contact Info

mcowell [at] cyber [dot] law [dot] harvard [dot] edu

Role in the Team

Research Assistant, Diagnostic Kits
I am characterizing the R&D process that brings diagnostic kits to market with a particular focus on which steps involve patent (or other IP) activity.

Recent Activity on the Wiki

Special:Contributions/Mac

Weekly Tasks and Results

Understand & document diagnostic kit development pipeline
Complete Glossary of important concepts in Diagnostic Kit space


Resources

I keep some notes in Evernote and then transfer them to the wiki. You can view my ICP evernote collection here

Blogs and News

News

  • GEN- Genetic Engineering & Biotechnology News: Clinical Research & Diagnostics Channel (http://www.genengnews.com/transmed/)
    Content includes News, Articles, Tutorials, & Conferences/Meetings

Extended Literature Review

I am still refining my literature organizational system, but basically it involves 3 steps:

  • search (find literature from google, existing references, etc; get fulltext)
  • triage (select signal from noise; skim pdfs in extended collection for useful/relevant papers)
  • review (annotate & highlight selected papers and incorporate into the Diagnostic Kits Bibliography

In particular, I am still looking for the perfect solution for organizing the triage step. I've tried:

I like using papers the most overall, I like how effortless grabbing citations is with Zotero, and I like how Mendeley can synchronize PDFs between multiple computers and collaborators. Other Notes:

  • I'm afraid we're making future work for ourselves by not being mindful of collecting metadata when we list a citation in our wiki bibliographies, which are currently plaintext. I have a vision of us finishing the project and generating a SIMILE citeline eventually. Alas.
  • Zotero can convert references into the mediawiki citation format by drag and drop, but the family of cite templates must be installed in mediawiki; see my notes on how to install the cite templates.

Interviews

Navigation

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