User:Mac/Literature Review: Difference between revisions
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'''NOTE''': I take [http://evernote.com/pub/macowell/icp | '''NOTE''': I take [http://evernote.com/pub/macowell/icp realtime notes in evernote (available here)] and try to update this page daily. (I periodically synchronize them with the Diagnostic Kit pages on this wiki) | ||
I am still refining my literature organizational system, but basically it involves 3 steps: | |||
* '''search''' (find literature from google, existing references, etc; get fulltext) | |||
* '''triage''' (select signal from noise; skim pdfs in extended collection for useful/relevant papers) | |||
* '''review''' (annotate & highlight selected papers and incorporate into the [[Diagnostic Kits#Bibliography|Diagnostic Kits Bibliography]] | |||
In particular, I am still looking for the perfect solution for organizing the triage step. I've tried: | |||
* [http://www.zotero.org/100ideas/items Zotero] | |||
* [http://www.mendeley.com/collections/33560/ICP-Diagnostics-Pipeline/ Mendeley] | |||
* [http://mekentosj.com/papers/ Papers]. | |||
I like using papers the most overall, I like how effortless grabbing citations is with Zotero, and I like how Mendeley can synchronize PDFs between multiple computers and collaborators. Other Notes: | |||
* I'm afraid we're making future work for ourselves by not being mindful of collecting metadata when we list a citation in our wiki bibliographies, which are currently plaintext. I have a vision of us finishing the project and generating a [http://simile.mit.edu/wiki/Citeline_User%27s_Guide SIMILE citeline] eventually. Alas. | |||
* Zotero can convert references into the mediawiki citation format by drag and drop, but the family of cite templates must be installed in mediawiki; see [http://evernote.com/pub/macowell/icp#Note/514ec54a-ab5c-4fa8-a638-58af29869429 my notes on how to install the cite templates]. | |||
== Market Reports == | == Market Reports == |
Latest revision as of 18:10, 17 April 2010
NOTE: I take realtime notes in evernote (available here) and try to update this page daily. (I periodically synchronize them with the Diagnostic Kit pages on this wiki)
I am still refining my literature organizational system, but basically it involves 3 steps:
- search (find literature from google, existing references, etc; get fulltext)
- triage (select signal from noise; skim pdfs in extended collection for useful/relevant papers)
- review (annotate & highlight selected papers and incorporate into the Diagnostic Kits Bibliography
In particular, I am still looking for the perfect solution for organizing the triage step. I've tried:
I like using papers the most overall, I like how effortless grabbing citations is with Zotero, and I like how Mendeley can synchronize PDFs between multiple computers and collaborators. Other Notes:
- I'm afraid we're making future work for ourselves by not being mindful of collecting metadata when we list a citation in our wiki bibliographies, which are currently plaintext. I have a vision of us finishing the project and generating a SIMILE citeline eventually. Alas.
- Zotero can convert references into the mediawiki citation format by drag and drop, but the family of cite templates must be installed in mediawiki; see my notes on how to install the cite templates.
Market Reports
- Molecular Biomarkers for Clinical Diagnostics and Drug Discovery and Development: http://www.reportbuyer.com/pharma_healthcare/drug_discovery/molecular_biomarkers_clinical_diagnostics_drug_discovery_development.html
- Biomarkers and Related Tests for Molecular Diagnostics and Pharma/ Biotech R&D: http://www.mindbranch.com/Biomarkers-Related-Tests-R183-014/
- Combination Drug/Diagnostic Products: Pathways to R&D and Commercial Success: http://www.the-infoshop.com/report/cd52985-pathways-rd_toc.html